McClintock Downloads

Genomics of mature and immature olfactory sensory neuron.  These data are from Nickell et al., 2012. J. Comp. Neurol., 520:2608-2629 and Heron et al., 2013. Mol Brain 22;6:49. doi: 10.1186/1756-6606-6-49.  The Excel file contains probabilistic predictions of which genes are expressed in mature versus immature olfactory sensory neurons, versus the sum of all other cell types in the olfactory epithelium.  Responses to bulbectomy, which differentially affects mature and immature olfactory sensory neurons, supports these predictions.

OSN Gene Database [8 Mb Excel File]

 

Mouse OSNs express 10,000 genes. These data are from Sammeta et al., 2007, J. Comp. Neurol., 502:1138-1156. This compressed Excel file (full or compressed versions are available) contains processed GeneChip microarray data that allows predictions of whether a gene is expressed in mature olfactory sensory neurons of mice.

Mouse OSNs [12.6 MB Excel file]

Mouse OSNs [3.30 MB Zip file]

 

Tissue expression patterns identify mouse cilia genes. These data are from McClintock et al., 2008, Physiolog. Gen., 32:198-206. This Excel file contains a compilation of more than 2,000 mouse genes that we and others predict are linked to cilia.

Mouse Ciliome Resource [1 MB Excel File]

 

Genomics of the lobster olfactory organ. These data are from Stepanyan et al., 2006. The Excel file provides a summary guide to the features of each EST, including information about the sequencing run, BLAST matches, and NCBI GenBank accession numbers. The sequence file submitted to NCBI is available as a text file, as are the individual BLAST searches, which are compressed as groups.

Lobster (Homarus americanus) ESTs [Excel file]

Homarus EST seqs [Text file]

Ha BLAST 2003 data directory

Ha BLASTN BLASTX nr 2005 data directory

Ha BLASTN dbEST 2005 data directory